Configuration failed for package hdf5r

Author: duhu

August undefined, 2024

WebDec 16, 2024 · installation of package ‘hdf5r’ had non-zero exit status 环境操作系统版本 Linux version 3.13.0-161-generic (buildd@lcy01-amd64-003) (gcc version 4.8.4 (Ubuntu 4.8.4-2ubuntu1~14.04.4) ) R版本 R version 3.4.4 解决方案查看系统上是否有 libhdf5_hl.so.100 locate libhdf5_hl.so.100 在R中查看库路径环境变量 Sys.getenv … WebFeb 5, 2024 · Download the HDF5 1.10.6 (CMake version) from official HDF Group site. Use CMake to build the HDF5. cmake .. make and sudo make install. The result of this process is a generated folder called HDF5-1.10.6-Linux inside the build folder (not in the system /usr/ or /usr/local/) This HDF5-1.10.6-Linux folder have this folder structure inside of it:

R studio failed to install the latest development version of hdf5r …

WebERROR: configuration failed for package ‘sf’ * removing ‘/share/work/biosoft/R/R-v3 .6.1 /lib64/R/library/sf’ ERROR: dependency ‘sf’ is not available for package ‘spdep’ * removing ‘/share/work/biosoft/R/R-v3 .6.1 /lib64/R/library/spdep’ ERROR: dependency ‘spdep’ is not available for package ‘adegenet’ * removing ‘/share/work/biosoft/R/R-v3 .6.1 … WebApr 11, 2024 · ERROR: configuration failed for package ‘hdf5r ... In install.packages("hdf5r") : installation of package ‘hdf5r’ had non-zero exit status. old orange labeled astros ball

Error while installing hdf5 via BiocManager - Bioconductor

WebApr 11, 2024 · 系统上通过命令行安装 clamav查毒软件。. 以下是安装步骤： 1. 打开终端或控制台，以root权限登录。. 2. 使用以下命令安装 clamav： Debian/Ubuntu系统：sudo apt-get install clamav CentOS/RHEL系统：sudo yum install clamav 3. 安装完成后，使用以下命令更新病毒库： sudo freshclam 4 ... WebR包hdf5r安装失败 SeuratDisk 安装失败 ... ERROR: configuration failed for package ‘hdf5r’ ... old orange crush clocks

installation error, with hdf5 1.8.13 · Issue #159 · …

WebMar 21, 2024 · ERROR: configuration failed for package ‘sf’ * removing ‘/share/work/biosoft/R/R-v3 .6.1 /lib64/R/library/sf’ ERROR: dependency ‘sf’ is not available for package ‘spdep’ * removing ‘/share/work/biosoft/R/R-v3 .6.1 /lib64/R/library/spdep’ ERROR: dependency ‘spdep’ is not available for package ‘adegenet’ * removing … Webhdf5r: A package to provide an interface to hdf5 from R. names.H5Group. Get the names of the items in the group or at the / root of the file. match.call.withDef. Match arguments in a … my music tubeWebDec 15, 2024 · R包hdf5r安装报错-load filed 问题. 在linux上安装R包Seurat的依赖包 hdf5r hdf5r是R中读取hdf5格式文件的包. 报错信息 old orange lawn mower

"WebError: package or namespace load failed for ‘hdf5r’ in dyn. load ( file, DLLpath = DLLpath, ...): 解决办法: hdf5-devel >= 1.8.13 版本的不行，升级版本到1.10.5 解决. 详细方法. … " - Configuration failed for package hdf5r

Configuration failed for package hdf5r

WebFeb 28, 2024 · I searched the Ubuntu package index for HDF5 and installed the libraries libhdf5-10, libhdf5-dev, hdf5-tools, and pbh5tools. It seems to be correctly installed as … WebApr 11, 2024 · 系统上通过命令行安装 clamav查毒软件。. 以下是安装步骤： 1. 打开终端或控制台，以root权限登录。. 2. 使用以下命令安装 clamav： Debian/Ubuntu系 …

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Websudo yum install hdf5-devel install. packages ("hdf5r") conda install r-hdf5r 复制代码 hdf5版本过低 configure: error: The version of hdf5 installed on your system is not … WebOct 21, 2024 · - configure: error: The version of hdf5 installed on your system is not sufficient. Please ensure that at least version 1.8.13 is installed Reason Your system hdf5 version is too old. To fix it, you need to install brew. You might also have gcc version that is too low. Solution: Install brew first (see here, or reference official docs ).

WebJan 8, 2013 · installation error, with hdf5 1.8.13 #159. Closed. aseetharam opened this issue on Sep 18, 2024 · 2 comments. WebAug 10, 2024 · You might try installing a binary with utils::install.packages ("textshaping", type = "binary"). – Kevin Ushey Aug 12, 2024 at 19:44 Add a comment 1 Answer Sorted …

WebApr 11, 2024 · sudo yum install hdf5-devel install.packages("hdf5r") conda install r-hdf5r hdf5版本过低 configure: error: The version of hdf5 installed on your system is not sufficient. WebMay 19, 2024 · conda 安装r-units（ERROR: configuration failed for package ‘units’）一开始，我是想安装ggVennDiagram这个包的，但是因为units和sf这两个包安装失败，导致ggVennDiagram不能安装成功。注：我是使用conda虚拟环境中的R. 然后我就单独安装了units这个包，提示

Webhdf5r: A package to provide an interface to hdf5 from R. names.H5Group. Get the names of the items in the group or at the / root of the file. match.call.withDef. Match arguments in a call to function and add default values. guess_nelem. Guess the HDF5 datatype of …

Web'HDF5' is a data model, library and file format for storing and managing large amounts of data. This package provides a nearly feature complete, object oriented wrapper for the … old orange juice containersWebApr 19, 2024 · There's no package called hdf5, which is why you get the package ‘hdf5’ is not available (for R version 3.5.1) error. You need to get the name correct, otherwise … old orange roofed eateries crosswordWebApr 30, 2024 · (Yes /no /cancel) yes installing the source package ‘hdf5r’ 然后可怕的事情就出来了： configure: error: hdf5 does not seem to be installed on your platform. Please install the hdf5 library. my music vidWebApr 3, 2024 · even if hdf5 library is installed, install.packages (hdf5r) cannot find library path. You have to specify h5cc or h5pcc path, which h5cc should show you the path. … my music updateWeb实话说，这是一个非常庞大的问题，因为这个牵扯到服务器硬件，系统等软件因素，还有一些网络问题导致的玄学问题，复杂性导致它很有挑战。但是，我们不能因为有挑战性就放弃了，毕竟总会不停遇到这个问题，而且科研人从不低头。所以，我不准备废话，直接上结论 ... my music video 64Websudo yum install hdf5-devel install. packages ("hdf5r") conda install r-hdf5r 复制代码 hdf5版本过低 configure: error: The version of hdf5 installed on your system is not sufficient. old orange juice brandsWebThe required HDF5 library files can be installed as follows: - Debian-based (e.g. Debian >= 8.0, Ubuntu >= 15.04): 'sudo apt-get install libhdf5-dev' - Old Debian-based (e.g Debian … old orange cars